PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1027160.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | HSF | ||||||||
Protein Properties | Length: 305aa MW: 34025.1 Da PI: 4.8357 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 111.9 | 4.3e-35 | 27 | 117 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkel 93 Fl+k+y++++d++++++isw++ g+sfvv++++ fa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++g+k+l Pd.00g1027160.m01 27 FLTKTYQLVDDPTIDDVISWNDGGSSFVVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVIPDR---------WEFSNDCFRRGEKRL 109 9****************************************************************999.........*************** PP XXXXXXXX CS HSF_DNA-bind 94 lekikrkk 101 l++i+r++ Pd.00g1027160.m01 110 LCEIQRRR 117 ******96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence |
MAPTSVEPNG GESTSGESSH RALPTPFLTK TYQLVDDPTI DDVISWNDGG SSFVVWNPTV 60 FARDLLPKYF KHNNFSSFVR QLNTYGFRKV IPDRWEFSND CFRRGEKRLL CEIQRRRIMP 120 PAPSVAVSPM ATAAVVPNAK PMISPSNSGE EQVISSSSSP IRAPSELMDE NEKLRKENMQ 180 LTKELAEVKS LCNNIFSMVS NYAYAQSETE SGFPYVKPLD LMPEKWFSGD GEKEEEEASP 240 KLFGVAIGAK RARETVGDGV EEDETGLRLQ QPSGGGDVKS EPIDVDRQET PWLNQRHTAN 300 QRVCN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62020.1 | 2e-91 | HSF family protein |