PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g101900.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 714aa MW: 79033.5 Da PI: 8.8804

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g101900.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	616	665	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Pd.00g101900.m02 616 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 665 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 714 aa Download sequence
MGEEKVWMCF ELLAKNRCAE EFLFLDSESW QLKRLDYGFN GYQVPATPRA TRSARRRGAI 60 RKRVDDNSMG AFDLLATIAG KLLLEGESSP ASSHTSKDQC AGTKENCLDG DKPLKVEPCD 120 QGSCDRRIPV SDHISQGPNQ SSCSKESPVH QNESSVMTTS NCSERFASDM LVSGKCKNET 180 GSFTSKIEAG SSGCREAGEF KLDGEVKTLI KDETNKSAKV LIGTGPDMCG LEDPVVWEGE 240 PPALVSSDSS TKVPMYVDHI PQRSFPTSRD DVKVVSRDDD ENSSGCTHPV TSIKYSRPAP 300 LRIGDRRIRK ILASKYWKVA PKLKDDIHSN SCKWLPCTKR MYRDQKPNYH NRKNCYKRQR 360 SQMNIPFKKR KLFDRSAVLN IDEGIRREGF FDSRGKGITG DASCSKMQGA AMNSSSLAGQ 420 HSSFQSRSSH VKLRIKSFRV PELFIEIPDT ATVGSLKKTV MDAVTAVLGG GVCVGVLLQG 480 KKVRDDNKTL LQTGISQDNQ LDSLGFTLEP NSSQTPPPLC SGDSPHMLPC DVLQPLTRYP 540 SGPTSEASPE PHTASLGNFI ESDHDSAPSP TDMSAEKSTT DSKALVAVPD MSVEALAVVP 600 GHRKSKRFDI GQRRIRRPFS VAEVEALVQA VEKLGTGRWR DVKLRAFDNA KHRTYVDLKD 660 KWKTLVHTAR ISPQQRRGEP VPQELLDRVL TAHAYWSQQQ AKQQLKQPET CLLV

Sequence ? help Back to Top

Protein Sequence Length: 714 aa Download sequence

MGEEKVWMCF ELLAKNRCAE EFLFLDSESW QLKRLDYGFN GYQVPATPRA TRSARRRGAI  60
RKRVDDNSMG AFDLLATIAG KLLLEGESSP ASSHTSKDQC AGTKENCLDG DKPLKVEPCD  120
QGSCDRRIPV SDHISQGPNQ SSCSKESPVH QNESSVMTTS NCSERFASDM LVSGKCKNET  180
GSFTSKIEAG SSGCREAGEF KLDGEVKTLI KDETNKSAKV LIGTGPDMCG LEDPVVWEGE  240
PPALVSSDSS TKVPMYVDHI PQRSFPTSRD DVKVVSRDDD ENSSGCTHPV TSIKYSRPAP  300
LRIGDRRIRK ILASKYWKVA PKLKDDIHSN SCKWLPCTKR MYRDQKPNYH NRKNCYKRQR  360
SQMNIPFKKR KLFDRSAVLN IDEGIRREGF FDSRGKGITG DASCSKMQGA AMNSSSLAGQ  420
HSSFQSRSSH VKLRIKSFRV PELFIEIPDT ATVGSLKKTV MDAVTAVLGG GVCVGVLLQG  480
KKVRDDNKTL LQTGISQDNQ LDSLGFTLEP NSSQTPPPLC SGDSPHMLPC DVLQPLTRYP  540
SGPTSEASPE PHTASLGNFI ESDHDSAPSP TDMSAEKSTT DSKALVAVPD MSVEALAVVP  600
GHRKSKRFDI GQRRIRRPFS VAEVEALVQA VEKLGTGRWR DVKLRAFDNA KHRTYVDLKD  660
KWKTLVHTAR ISPQQRRGEP VPQELLDRVL TAHAYWSQQQ AKQQLKQPET CLLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-112	MYB_related family protein