PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g101840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 694aa    MW: 78057.9 Da    PI: 6.2718
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g101840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS380.32.4e-1163216902372
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL+ecA+av s d++ a++lL+++++++sp+g ++qR+a+yf+e+L+arla+  s  y+ l   +ts   ++e l+a+++++ ++P+ k+ 
  Pd.00g101840.m01 321 CKLLTECAQAVGSYDQQYASELLKQIRQHSSPYGYATQRVAHYFAEGLEARLAGARSLSYAPLLIMHTS---TTEILKAYQVYVSACPFKKML 410
                       589***************************************************888888888888887...89******************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       h+ aN++I++ +e+++r+HiiDf+is+GlQWp+L+q+L+++++gpp+lRiT+++ p++g   +e++eetg+rLak+ ++ gvpfe+nv +ak+
  Pd.00g101840.m01 411 HFFANRTIMKQTEKATRLHIIDFGISYGLQWPCLIQSLSEKTGGPPNLRITAIEFPQPGfrPAERIEETGRRLAKYSKRYGVPFEYNV-IAKK 502
                       **********************************************************9****************************9.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278
                       +e+++leeL+++++E+++Vn++++l++++de+v ++++rd+vL+l+k+++P+++ +   +  +n++ F++rf + l ++ alfd++ea++pr+
  Pd.00g101840.m01 503 WETIRLEELQIDRNEVIVVNCMHRLKQIPDETVMMNNPRDAVLNLIKRINPDLFMHGVVNGTYNAPAFVTRFKQLLFHFHALFDMYEATVPRD 595
                       ********************************************************************************************* PP

              GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370
                       +e+r   Er+++gr+i+nv+aceg er+er et+++W++r  +aGFk++pl+ + +k++k++ ++++  + + +e++ +++++gWk+r +v++
  Pd.00g101840.m01 596 DEHRLLFERAIFGRDIMNVIACEGLERVERPETYKQWQARYVRAGFKQLPLDRELVKKVKTMSKMMGyHKDFGIEDDGEWMLQGWKGRIIVAL 688
                       ******************************************************************99999********************** PP

              GRAS 371 Sa 372
                       Sa
  Pd.00g101840.m01 689 SA 690
                       98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 694 aa     Download sequence    
MEELNFGHGS NSVSSDQNLV SGLQVNHEPT NKLLLPANLD RPSDSGTSSE GDTVDSSDCN  60
LPVLKYISDI LLEEDLEGKP CMLEDILGLQ AAEKSFYDAL NQKDPPLPNQ PSFSVYQSFE  120
NSDGGFQSSN GSISGFQSSN GSIAAKTGSV WDFSETSHVQ TSLVELLSDT TLVSDSFSDT  180
QSLGNFRGVG EGNEIIDLEG YHCTPPGPNT LYRNLASVPE NYGYHSTNGS KGKKNHQREE  240
GHYTEEGRSN KQSAAFADDS DLQEMFDKVL QGVNPESESC FHDESLNAEG TRKLQHNKQS  300
KGSKTTCSKK PNSNRQVVDL CKLLTECAQA VGSYDQQYAS ELLKQIRQHS SPYGYATQRV  360
AHYFAEGLEA RLAGARSLSY APLLIMHTST TEILKAYQVY VSACPFKKML HFFANRTIMK  420
QTEKATRLHI IDFGISYGLQ WPCLIQSLSE KTGGPPNLRI TAIEFPQPGF RPAERIEETG  480
RRLAKYSKRY GVPFEYNVIA KKWETIRLEE LQIDRNEVIV VNCMHRLKQI PDETVMMNNP  540
RDAVLNLIKR INPDLFMHGV VNGTYNAPAF VTRFKQLLFH FHALFDMYEA TVPRDDEHRL  600
LFERAIFGRD IMNVIACEGL ERVERPETYK QWQARYVRAG FKQLPLDREL VKKVKTMSKM  660
MGYHKDFGIE DDGEWMLQGW KGRIIVALSA LKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein