PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1011450.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GRAS | ||||||||
Protein Properties | Length: 495aa MW: 56054 Da PI: 4.3186 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 112.9 | 4.1e-35 | 163 | 481 | 2 | 315 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 ++lL + ea++ g+ el + +L lse ++p g++++Rla+ + + + + +++s ++ aa++lf++ +P +f Pd.00g1011450.m01 163 RHLLKAYSEAMEMGQRELEEVILRCLSEKVNPLGQSLERLAFNLCQEVDDQQGD----Y-----LKQES---CKNFEAAFNLFYQSFPDGRF 242 7999999***********************************877665555444....2.....22333...56777999************ PP GRAS 94 shltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg......skeeleetgerLakfAeelgvpfef 178 +h +aN aIlea+ ++ e+vHi+Dfd+++G+Q L++a a+R + +l++T+++ ++ + + eet+++L++ A+++g++++ Pd.00g1011450.m01 243 AHYVANTAILEAIPEDaETVHIVDFDMGEGVQLSQLIEAVAQRHK---TLKVTAIKWDVEEtedgapPQWRFEETKRQLQHHARSFGLNLKV 331 *************8777**************************66...5******976555677999999********************** PP GRAS 179 nvlvak.rledleleeLrvkpgEalaVnlvlqlhrll........desvsleserdevL...klvkslsPkvvvvveqe..adh.nsesFle 255 + ++ k +++++ + r +E la n+++ l ++ e v+l +++L ks + ++++ + + a++ n++sF Pd.00g1011450.m01 332 EEIAIKdLVSEVKKANKRGGGREFLAFNCMVGLPHMRrrrsrgliLEFVQL---AKDLLassANYKSSNRGIITFGDGDacAKLgNGSSFSS 420 **9555245555555555555************999833333333222222...22333111345666778*******97556699****** PP GRAS 256 rflealeyysalfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekW 315 f l +y al++s+e+++pr+ e+r+++E +++++ +++ ++ + + ++ +l+ W Pd.00g1011450.m01 421 FFDGYLAHYQALLESIESNFPRHLaEARMVIELMFVAPYVSSQALFQKWNEVREECHLQPW 481 **********************98799*******999998876666666544444445555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 495 aa Download sequence |
MMQSALLPPF WPYLNVINSP FDQFEYNDVN VGSSDFSSPF MASDEFSETS SFPFATMFSG 60 DFEQLADCDH LLQVTSSVEE FPMDLGGFEP NYLIGDIEDM YACLERSEGS TLPSQQFSIE 120 GNDVWSPNSL MTSEASSMDV TSIQQSLTLP REEMEIDNEL SIRHLLKAYS EAMEMGQREL 180 EEVILRCLSE KVNPLGQSLE RLAFNLCQEV DDQQGDYLKQ ESCKNFEAAF NLFYQSFPDG 240 RFAHYVANTA ILEAIPEDAE TVHIVDFDMG EGVQLSQLIE AVAQRHKTLK VTAIKWDVEE 300 TEDGAPPQWR FEETKRQLQH HARSFGLNLK VEEIAIKDLV SEVKKANKRG GGREFLAFNC 360 MVGLPHMRRR RSRGLILEFV QLAKDLLASS ANYKSSNRGI ITFGDGDACA KLGNGSSFSS 420 FFDGYLAHYQ ALLESIESNF PRHLAEARMV IELMFVAPYV SSQALFQKWN EVREECHLQP 480 WFGLEANVYT MLNIP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 343 | 349 | VKKANKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G08250.1 | 4e-14 | GRAS family protein |