PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g100950.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ERF

Protein Properties

Length: 666aa MW: 73013.4 Da PI: 7.6827

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g100950.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	42.2	2e-13	413	465	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g++ AeIrdp + r r+++g + t eeAa a+++a ++++g Pd.00g100950.m02 413 RYRGVRQRR-SGKFTAEIRDPA--KkvSRNRVWVGCYETSEEAALAYDRASLRIHG 465 7***999.7*****84..34335**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 666 aa Download sequence
MHMAGSSGCA FGNSPVVCNR CGIQIVLRQV QEHAQNCPGV QPQVQQADGA LDTSASGTSA 60 TADQTQAATQ SGVAQSQAQV FQIFQIISVI PPGSDPDQKA NSSSQAVVQA AVQTAEQWYQ 120 HQQQYQQVSP LNNPQSCGCP NLIFQTTSSQ LCCLLLVKSE TLILHNSSRF TLMLSNLGIL 180 FNSALLCVQF NDRFLVNISA ISPMYSSNHL HSYIPGVNLI HSLYMFMPIH SLSGTLHCLR 240 AFNLANLGGS RRPMMPIHGV QSQTSVQTAG GLHMRPVHPT VHLPSTNQSN MVRTKNLVQS 300 GANWRPTTSE RHAEQESESS AEQIAKNVTH DVGTASAVVG DAEVKTVKSE MDMKSIDNEN 360 KPTGEDKTNH GDTSSKEIPD IHALENGESV SQSMLNAADQ NKVQKLGVAR GRRYRGVRQR 420 RSGKFTAEIR DPAKKVSRNR VWVGCYETSE EAALAYDRAS LRIHGSKAVL NFPICHIRDC 480 LERASTCPNH RQAQRTGERG CHSFNNAEIH CTLLIAADPL FPRTGKTDLY ESPFLSKLGV 540 VDPKATEERT FNVGVDEVVN LLMCSLVPKT PFTDMLLKPK PEAQLINEFF DQRISIISQV 600 AEYTMRGDPN ISFTLTIGDR SSWKGCIDNL YKSVEDIDGQ HLMSTSHRTI LLSPKPAPGF 660 SYANHP

Sequence ? help Back to Top

Protein Sequence Length: 666 aa Download sequence

MHMAGSSGCA FGNSPVVCNR CGIQIVLRQV QEHAQNCPGV QPQVQQADGA LDTSASGTSA  60
TADQTQAATQ SGVAQSQAQV FQIFQIISVI PPGSDPDQKA NSSSQAVVQA AVQTAEQWYQ  120
HQQQYQQVSP LNNPQSCGCP NLIFQTTSSQ LCCLLLVKSE TLILHNSSRF TLMLSNLGIL  180
FNSALLCVQF NDRFLVNISA ISPMYSSNHL HSYIPGVNLI HSLYMFMPIH SLSGTLHCLR  240
AFNLANLGGS RRPMMPIHGV QSQTSVQTAG GLHMRPVHPT VHLPSTNQSN MVRTKNLVQS  300
GANWRPTTSE RHAEQESESS AEQIAKNVTH DVGTASAVVG DAEVKTVKSE MDMKSIDNEN  360
KPTGEDKTNH GDTSSKEIPD IHALENGESV SQSMLNAADQ NKVQKLGVAR GRRYRGVRQR  420
RSGKFTAEIR DPAKKVSRNR VWVGCYETSE EAALAYDRAS LRIHGSKAVL NFPICHIRDC  480
LERASTCPNH RQAQRTGERG CHSFNNAEIH CTLLIAADPL FPRTGKTDLY ESPFLSKLGV  540
VDPKATEERT FNVGVDEVVN LLMCSLVPKT PFTDMLLKPK PEAQLINEFF DQRISIISQV  600
AEYTMRGDPN ISFTLTIGDR SSWKGCIDNL YKSVEDIDGQ HLMSTSHRTI LLSPKPAPGF  660
SYANHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17500.1	7e-16	ERF family protein