PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g1008650.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 321aa MW: 36647.8 Da PI: 9.8037 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.2 | 3.4e-12 | 26 | 70 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T+eE+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + Pd.00g1008650.m01 26 KGSLTEEEQRLVICLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 70 6788******************.*********.*****999999766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MNTPLNRDAK SCLERWKNYL KPGIKKGSLT EEEQRLVICL QAKHGNKWKK IAAEVPGRTA 60 KRLGKWWEVF KEKQQREQKN NKTVDPVDEG KYDRILETFA EKLVQERAAP SYLMATSNGS 120 YLHTETSSPA PTMLPPWLSN SNVTSNVRPP SPSVTLSLSP TVAPSPPIPW LQPDRGSDNS 180 IVLGNMPHHG SVPVCGENLV ISELVECSRE LEEVHRAWAA HKKEASWRLR RVELQLESEK 240 ACRRREKMEE IEAKVKALRE EQKAALDRIE AEYREQLAGL RRDAEAKEQK LTEQWVAKHL 300 RLSKFLDQMG GRPRLAEPNG R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37630.1 | 1e-125 | MYB family protein |