PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1004200.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 304aa MW: 33625.7 Da PI: 6.4401

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1004200.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	108	5.1e-34	18	72	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl Pd.00g1004200.m01 18 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 72 79****************************************************8 PP
2	Myb_DNA-binding	63.6	3.8e-20	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav+qlGg+ t+k + r mg +g+t +++ks++qky+ Pd.00g1004200.m01 20 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 71 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MDPINGGNSL NNPNLASKQR LRWTHELHER FVDAVAQLGG PDRATPKGVL RVMGVQGLTI 60 YHVKSHLQKY RLAKYLPDSS SDADKKEPGD VLSNLDGSSG MQITEALKLQ MEVQKRLHEQ 120 LEVQRQLQLR IEAQGKYLKK IIEEQQRLSG VRSEAPGSGH LARLSDDNCP ESDNKTDPAT 180 PAPTSECPLQ DKAAKECTPA KSLSIDESFS SHHEPLTPDS ACHVDSPAES PKAERSMKKR 240 RVIMGEAFAD PEVVLSHQIL ESSFNSSYQQ AHTTFLPREQ FDPSSGISFR NENILEKVAG 300 SDVV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-118	G2-like family protein