PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1000200.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 189aa MW: 20976.1 Da PI: 6.5093

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1000200.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	74.4	1.5e-23	4	48	2	46
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehv 46 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+h+ Pd.00g1000200.m01 4 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHM 48 9*****************************************996 PP
2	Myb_DNA-binding	30.9	6.4e-10	5	47	1	39
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkq 39 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl + Pd.00g1000200.m01 5 RMRWTSTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAH 47 89*********************************99999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MRAPRMRWTS TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHMYR TVKTTDKPAA 60 SSDGSGEDDI LSPIGSATDL HGLRSPNQFP EQRGPSDRSS VQPDLDYTSS TTLWSNSSSS 120 REAFPHTSYH DMDGLTPVSS QLQKISGHQI QECDSTTHLK SYLGSNFETR NPSLEFTLGR 180 PDWNGKPHD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	2e-48	G2-like family protein