PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g098910.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 245aa MW: 26988 Da PI: 7.5409 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.8 | 8.8e-21 | 123 | 172 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ r +r++lg+f taeeAa+a+++a+ +++g Pd.00g098910.m01 123 KYRGVRRRP-WGKWAAEIRDPR----RaARVWLGTFETAEEAARAYDKAAIEFRG 172 8********.**********82....48***********************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 245 aa Download sequence |
MPSHAIRIQH EQDHCIMVSA LKHVISGGIN AGGSGPTSQQ QQQLMGAVHS ATSSVPSTRD 60 GTQSATDQVH MLSFSAEGDT CRVCGIEGCL GCDYFPSTTL PDRNKQLNLG SGANAGTRKG 120 KNKYRGVRRR PWGKWAAEIR DPRRAARVWL GTFETAEEAA RAYDKAAIEF RGDKAKLNFS 180 LTSSDEHNNI TSSSRTRTSS QLIRSMEEAD QDKVNPITVK QSEKIEIYES SAPQEENDQF 240 LWDML |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34410.1 | 1e-28 | ERF family protein |