PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g094420.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 194aa    MW: 22315.6 Da    PI: 5.2101
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g094420.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR170.63.7e-2284174190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                       +fY++YA  +GFs+r+s+ ++s + g ++ r++vCskeg+r+++ ++ ++  r++r+etr +C+a++ vk    ++ + vtk+++eH+H la
  Pd.00g094420.m01  84 RFYCNYALAIGFSIRRSRLRRS-EGGVVMGRQWVCSKEGSRSKKWTNrDDMVRTPRKETRENCHATFAVKYCPkRDAYIVTKFVKEHSHRLA 174
                       5********************9.8999***************9988846677889*****************999**************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MEAETSKTNG IQGQNSVPNS EGYFAEAESL EETENVPSLQ ILDSRTEEST EKSGQFEYDG  60
LNFQNMSIAD FAEREFAKVE EAERFYCNYA LAIGFSIRRS RLRRSEGGVV MGRQWVCSKE  120
GSRSKKWTNR DDMVRTPRKE TRENCHATFA VKYCPKRDAY IVTKFVKEHS HRLANSQAWL  180
IEEFTGHNDS ENDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-16FAR1 family protein