PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g093000.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GATA

Protein Properties

Length: 577aa MW: 64233.2 Da PI: 7.1256

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g093000.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	36.4	7.1e-12	50	76	9	35
GATA 9 TplWRrgpdgnktLCnaCGlyyrkkgl 35 TplWR+gp ++ LCnaCG ++r kg+ Pd.00g093000.m01 50 TPLWRNGPPDKPVLCNACGSRWRTKGT 76 ******55555*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MILSRLIRTR FEQDVSCVLV GYRSKSFEER TRQSDGQSMQ SYAAADHEGT PLWRNGPPDK 60 PVLCNACGSR WRTKGTLANY TPLHARAEPD DYEDHRVSRV KSISINKNKE IKLVKRKQNP 120 DSVMVGGVAA DYAHGFRKVT DEDTSNRSSS GSAVSNSESC AQFGSADASD LTGPAQSMVW 180 DSMVPSRKRT CIGRPKPSPV EKLTKDLYTI LHEQQSSYFS GSSEEDLLFE CETPMVSVEI 240 GHGSVLMRHP SSITREEESE ASSLSVDNKQ CHINEAYSHP ATLLVHNNKG IIMTSSVTGK 300 MNNLAGQGMQ QEPLKRDKSQ YDNFQILGNH NSPLCHVDLN DILNFEEFTR QLTNEEQQQL 360 LKHLPPVDVV KFPYSLKSMF DSSQFRENLT SLQQLLAEGV FDISFLGAKT EDCKTLKRLV 420 LSNSSKSKWV ERYHLLKKCK TSPGKSVISG PNALASSNFR HVKRLRDSET QSFPDVKMMM 480 KSPKRIIVKG SNENKDLLDY DGSCFSPRSL FALPADGSSL LMESMNFVDE SSDQDLLLDL 540 PSNGSFAQAE LLHPAMSFGA QQASTSSSSI YPHVLHP

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MILSRLIRTR FEQDVSCVLV GYRSKSFEER TRQSDGQSMQ SYAAADHEGT PLWRNGPPDK  60
PVLCNACGSR WRTKGTLANY TPLHARAEPD DYEDHRVSRV KSISINKNKE IKLVKRKQNP  120
DSVMVGGVAA DYAHGFRKVT DEDTSNRSSS GSAVSNSESC AQFGSADASD LTGPAQSMVW  180
DSMVPSRKRT CIGRPKPSPV EKLTKDLYTI LHEQQSSYFS GSSEEDLLFE CETPMVSVEI  240
GHGSVLMRHP SSITREEESE ASSLSVDNKQ CHINEAYSHP ATLLVHNNKG IIMTSSVTGK  300
MNNLAGQGMQ QEPLKRDKSQ YDNFQILGNH NSPLCHVDLN DILNFEEFTR QLTNEEQQQL  360
LKHLPPVDVV KFPYSLKSMF DSSQFRENLT SLQQLLAEGV FDISFLGAKT EDCKTLKRLV  420
LSNSSKSKWV ERYHLLKKCK TSPGKSVISG PNALASSNFR HVKRLRDSET QSFPDVKMMM  480
KSPKRIIVKG SNENKDLLDY DGSCFSPRSL FALPADGSSL LMESMNFVDE SSDQDLLLDL  540
PSNGSFAQAE LLHPAMSFGA QQASTSSSSI YPHVLHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.2	1e-138	GATA family protein