PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g081740.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

AP2

Protein Properties

Length: 473aa MW: 52636.1 Da PI: 7.2672

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g081740.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	57.7	2.9e-18	59	108	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp + + +r++lg+f tae Aa a++aa+++++g Pd.00g081740.m01 59 HYRGVRQRP-WGKFAAEIRDP---N-KaARVWLGTFETAEAAALAYDAAALRFKG 108 7******.******9...3.35*********************9987 PP
2	AP2	59.2	9.7e-19	284	333	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr++ +g+W+AeIrdp + r +r +lg+++tae Aa a+++a+++++g Pd.00g081740.m01 284 HYRGVRQRN-WGKWAAEIRDP---N-RaARLWLGTYDTAEAAALAYDKAALSFKG 333 69**998.******8...3.47********************99887 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MSAMVSALAQ VIGTTDQTPV VQVPDEPLVN PLPSAMELHD DQPPQLQAAQ NQGNVRRRHY 60 RGVRQRPWGK FAAEIRDPNK AARVWLGTFE TAEAAALAYD AAALRFKGSK AKLNFPERVQ 120 GGTELGYLTT TGPEDLAAGG SRRTELAHHN QPLSDHQYQL QANLNNVNLT QPDQYAQYFR 180 GGVAPKDVFI TSQFDKVDRK HGKRPLPSDE SEAKEEDQTF PVYSSRSQHD TSVMISALAQ 240 VIGNTDQTPL QQVQGNPLIT SQSSPAEIQS QPALQDQGNV RRQHYRGVRQ RNWGKWAAEI 300 RDPNRAARLW LGTYDTAEAA ALAYDKAALS FKGSKAKLNF PERVQESSEF GNLTITSQQQ 360 HNLNNPENVE RVQVTDPVVP NPPHQPISQP TYSNVFNYAP YVQGESNNVD YNFHQVLPSH 420 ENYGPQILPT TSSTSSSMPS QQEELRRMQV GSSRSSSDLP NKHRKDFEGS HSR

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MSAMVSALAQ VIGTTDQTPV VQVPDEPLVN PLPSAMELHD DQPPQLQAAQ NQGNVRRRHY  60
RGVRQRPWGK FAAEIRDPNK AARVWLGTFE TAEAAALAYD AAALRFKGSK AKLNFPERVQ  120
GGTELGYLTT TGPEDLAAGG SRRTELAHHN QPLSDHQYQL QANLNNVNLT QPDQYAQYFR  180
GGVAPKDVFI TSQFDKVDRK HGKRPLPSDE SEAKEEDQTF PVYSSRSQHD TSVMISALAQ  240
VIGNTDQTPL QQVQGNPLIT SQSSPAEIQS QPALQDQGNV RRQHYRGVRQ RNWGKWAAEI  300
RDPNRAARLW LGTYDTAEAA ALAYDKAALS FKGSKAKLNF PERVQESSEF GNLTITSQQQ  360
HNLNNPENVE RVQVTDPVVP NPPHQPISQP TYSNVFNYAP YVQGESNNVD YNFHQVLPSH  420
ENYGPQILPT TSSTSSSMPS QQEELRRMQV GSSRSSSDLP NKHRKDFEGS HSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07310.1	6e-39	ERF family protein