PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g080780.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 379aa    MW: 42604.8 Da    PI: 7.7239
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g080780.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH361.3e-11298344455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h e+Er+RR+++N++f  Lr+++P+       K++ ++ L  Av YI++L+
  Pd.00g080780.m01 298 KHVEAERQRREKLNHRFYVLRSVVPNV-----SKMDRSSLLADAVAYINQLK 344
                       699***********************6.....5*****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MEEIIPSSSP PQLFQENSVS FQQRLQFIVQ NRPEWWVYSI FWQASKDSND QVALSWAGGH  60
FKSPRDLASK RSNKMVNNKH FVERKKVINN REAESLFHEE MDLDMRLVDH GVGDVTDSEW  120
FYFYSISLTQ SFVAGHATNN ILGRSFCSGG FVWLAGDHEL QFYECERVKK ARMHGIKSLV  180
CIATPCGVLE LASLDVIKED LGVVHLSKSL FLSDNNRVSK QDSRARDGNA LVPPLESGML  240
SGGQKDLTKQ GDTKEAAPIN IGGSSADSAD NFTSDNTEST RLKKIGRSSS NHAPQLLKHV  300
EAERQRREKL NHRFYVLRSV VPNVSKMDRS SLLADAVAYI NQLKAKIEEL EDKIQSQPQN  360
PKRGNVSNAD HHYSQSTAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00870.17e-46bHLH family protein