PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g053990.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 259aa    MW: 29059.5 Da    PI: 9.9529
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g053990.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.32.5e-1715102196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       ffkvl        ++l+lp  f+ +++g++++  +  l+ ++g+ W+v l  + + +++++ +GW++F  ++ Lk+g f+vF ++g s+f   
  Pd.00g053990.m01  15 FFKVL--LGDDFPRQLCLPPAFMVHYNGPSHC--KCALRGPTGKWWTVGL--EEREDGFYFHEGWRRFLTDHSLKVGYFLVFDHQGGSKF--D 99 
                       66666..33444456***********999666..7***************..*******************************9998888..4 PP

                       EEE CS
                B3  94 vkv 96 
                       v++
  Pd.00g053990.m01 100 VTI 102
                       444 PP
2B342.11.6e-131552401399
                       TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                       + r+ +pk+ a + g +  ++  ++l+d++grsW+ kl+    + ++gr ++t+G     +an++  gD++vF+l++rse    v++fr+
  Pd.00g053990.m01 155 QYRMNIPKELAVAEGFI--GKERVMLKDPNGRSWNAKLRLdakEHHGGRLLMTQGLVACWQANNISLGDTIVFELVKRSEM--EVHIFRT 240
                       56899*****9888555..3346***************99776777777*************************9986555..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MARKPTKPSP KLPSFFKVLL GDDFPRQLCL PPAFMVHYNG PSHCKCALRG PTGKWWTVGL  60
EEREDGFYFH EGWRRFLTDH SLKVGYFLVF DHQGGSKFDV TIYHPMGCDM RRSIGNSVRP  120
GKRPATAAAV EETSTGSIVF RSEHPCFIGI LGKNQYRMNI PKELAVAEGF IGKERVMLKD  180
PNGRSWNAKL RLDAKEHHGG RLLMTQGLVA CWQANNISLG DTIVFELVKR SEMEVHIFRT  240
GAGGNMRSVV LDASSSVKH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.13e-20B3 family protein