PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g045670.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 463aa MW: 50535.6 Da PI: 6.9601

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g045670.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	56	1.6e-17	36	91	3	58
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpa 58 k++r + h+ v+gR RRvR++++c +F L++eLG+ +d+ ti+WLl q p+ Pd.00g045670.m01 36 LKRRRYIDKHSTVNGRHRRVRIPVTCCPGIFRLTQELGHRSDGDTIQWLLSQVRPE 91 6899999*********************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence
MEINQTLPTN TLAITDPPEN PSLQTQPPQQ QEQQQLKRRR YIDKHSTVNG RHRRVRIPVT 60 CCPGIFRLTQ ELGHRSDGDT IQWLLSQVRP ELVLPPQPNN RTRRLPPDPV PQPNCRYPGA 120 AEDGLDHKAV ARLPSVTVRA TVVQASTVFF DTPATLDKAE RLVAGAAAYG SQLVVFPEAF 180 VGGYPRGLMF DSATATLSPE EKQAFEKYYA SAIDVPGPEV DRLAKIASKY KVHLVMGVVE 240 RVGFYLCSTV LFFDSFGQCL GKHPKLLPLA SESPVWCSGA KLPLSVYDTE IGRIGGLVCW 300 DNRMPDLRTQ LYAKGIEIYC APTAEAREIW RSSMTHIALE GGCFVLSANQ FCRRKDYPLP 360 LECVSGDSND ATSLDIICAG GSVIVSPSGT ILAGPNYQGE SLISADLDLV EIARAKLEFG 420 GVGLGHNAGP NAVGWRRTSI PNPDLFAATV KTEVSDHANV LYA

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence

MEINQTLPTN TLAITDPPEN PSLQTQPPQQ QEQQQLKRRR YIDKHSTVNG RHRRVRIPVT  60
CCPGIFRLTQ ELGHRSDGDT IQWLLSQVRP ELVLPPQPNN RTRRLPPDPV PQPNCRYPGA  120
AEDGLDHKAV ARLPSVTVRA TVVQASTVFF DTPATLDKAE RLVAGAAAYG SQLVVFPEAF  180
VGGYPRGLMF DSATATLSPE EKQAFEKYYA SAIDVPGPEV DRLAKIASKY KVHLVMGVVE  240
RVGFYLCSTV LFFDSFGQCL GKHPKLLPLA SESPVWCSGA KLPLSVYDTE IGRIGGLVCW  300
DNRMPDLRTQ LYAKGIEIYC APTAEAREIW RSSMTHIALE GGCFVLSANQ FCRRKDYPLP  360
LECVSGDSND ATSLDIICAG GSVIVSPSGT ILAGPNYQGE SLISADLDLV EIARAKLEFG  420
GVGLGHNAGP NAVGWRRTSI PNPDLFAATV KTEVSDHANV LYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	1e-16	TCP family protein