PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g031910.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | C2H2 | ||||||||
Protein Properties | Length: 281aa MW: 31499.1 Da PI: 8.0891 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.9 | 0.00069 | 7 | 27 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k+F + + H+r+H Pd.00g031910.m01 7 CKICNKRFANGKAMGGHMRSH 27 *******************99 PP | |||||||
2 | zf-C2H2 | 13.4 | 0.00024 | 178 | 200 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k F++ L H +H Pd.00g031910.m01 178 YKCETCNKAFRSYQALGGHRASH 200 9***********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 281 aa Download sequence |
MEKHRICKIC NKRFANGKAM GGHMRSHLAK LPLPAKPQSP QQRQQQLSNS PESSPPLSST 60 NRAMHSSPSL DSAIHDGDSD TESHPRNPTR RRSKRRRKVI GKAAEAALEA EQVSSVSDAF 120 STEDVARCLI MLSMDKWGKW EKAKLKKEVD ESVDEDEDED EDESAFRAQT GALTQGKYKC 180 ETCNKAFRSY QALGGHRASH KKIIKTQRTF ECSFCFKQFD SGQALGGHKK VHYYNNLTHN 240 ARNVPSSSTN FVDNLVIDLN LPAPEEEDGE LSQLEFSTFS D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45120.1 | 8e-34 | C2H2 family protein |