PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g030860.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 142aa    MW: 15961.3 Da    PI: 4.6077
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g030860.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.88.2e-1327115196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+ vlt+ +  ++ +lv+p +f ++      +s   t+ + +g+ We+ +   ++sg+  l  +Wk F+ +n+Lk+gD +vF+ ++ s+++lv
  Pd.00g030860.m01  27 FDVVLTKTNIERLYQLVVPGRFSATLP---SCS-IPTVLTFRGKNWEMIY--HGSSGHKRLD-NWKAFAIDNNLKVGDACVFEQVECSSTRLV 112
                       677888888889999*******97773...344.4577889*********..9999998888.********************6544666666 PP

                       EEE CS
                B3  94 vkv 96 
                       ++v
  Pd.00g030860.m01 113 FRV 115
                       654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    
MGDLLTSNPV IELEGDEFWP LSGKPFFDVV LTKTNIERLY QLVVPGRFSA TLPSCSIPTV  60
LTFRGKNWEM IYHGSSGHKR LDNWKAFAID NNLKVGDACV FEQVECSSTR LVFRVQILRG  120
DIPSEFLDKL DGDNVDAPIV LE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.11e-06B3 family protein