PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g029260.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | SRS | ||||||||
Protein Properties | Length: 206aa MW: 21465.9 Da PI: 4.376 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 90.4 | 4e-28 | 51 | 122 | 83 | 154 |
DUF702 83 qsalsstklssaeskkeletsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++ +++ ++ s++ le ++P+evss+avfrcvrvss++d+++++aYqtav+igGh+fkGiL dqG+e+ Pd.00g029260.m01 51 TNSNPASNARNGASSSGLELGNFPAEVSSPAVFRCVRVSSIEDDDDQYAYQTAVNIGGHLFKGILCDQGPET 122 4444556667888889999999************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
MPGQLLGPTK CRVPHDVDNL LVIGRVVKRP EPTTFYYSDL CEMFTPLEKR TNSNPASNAR 60 NGASSSGLEL GNFPAEVSSP AVFRCVRVSS IEDDDDQYAY QTAVNIGGHL FKGILCDQGP 120 ETSNYNMNMA AAAAAAETSS GGGGVNIQPL NLIAGATTAA NTATIGGGDD EGVAGASTTV 180 IDPSSLYPAP LNTYMAGTQF FLPPRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G66350.1 | 4e-32 | SRS family protein |