PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g028060.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TCP

Protein Properties

Length: 207aa MW: 22404.2 Da PI: 8.9952

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g028060.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	106	5.9e-33	57	176	3	103
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....... 88 k ++ ++ Tkv+gR+RRvR++a caar+F+L++eLG+ +d++tieWLl+ a+ +i ++tgt++ +a+ ++++ +s++ +s + Pd.00g028060.m01 57 RKSASSRDRDTKVNGRGRRVRMPAMCAARIFQLTRELGHRSDGETIEWLLRHAESSIVAATGTGTLPAEPISTSAPAVSSQVPSLAcrahpls 149 5778999********************************************************888885553333333333333334444555 PP TCP 89 .............kaaksaakskksqks 103 + ++ +a++++++++ Pd.00g028060.m01 150 slngggqfmyplvS-SAHQAQPNQPHQQ 176 56666667766531.2222244444444 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MGSEMALAPL RNHEDPTLIP TAVLSSAALE TASSRQHSQQ SIQSLQPKTH NQLSQTRKSA 60 SSRDRDTKVN GRGRRVRMPA MCAARIFQLT RELGHRSDGE TIEWLLRHAE SSIVAATGTG 120 TLPAEPISTS APAVSSQVPS LACRAHPLSS LNGGGQFMYP LVSSAHQAQP NQPHQQPSIR 180 LDLCQPAGLD YTECTSMAKQ VYFTTLH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-33	TCP family protein