PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g027280.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 247aa MW: 27415.9 Da PI: 9.2566 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.9 | 5.4e-14 | 36 | 80 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT eE++++++a +++ + Wk+I +g +t q++s+ qky Pd.00g027280.m01 36 RESWTDEEHDKFLEALQLFDRD-WKKIEDFVG-SKTVIQIRSHAQKY 80 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MNSISSNNPQ SMGTASTPSD GSGKKVRKPY TITKSRESWT DEEHDKFLEA LQLFDRDWKK 60 IEDFVGSKTV IQIRSHAQKY FLKVQKSGTT AHVPPPRPKR KAAHPYPQKA SKNVLVPLQA 120 SIAYPSSMNA IASTYFPWDE TSIMINPASN QILLSHEEFT SFQGTEADIR SKGLARINKC 180 SLSGIESSSK TLPSSEIPEQ GKQAPLLHGI PDFSEVYSFI GSVFDPDSKG HAQKLREMDP 240 INFETVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09600.2 | 1e-101 | MYB_related family protein |