PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g021010.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family Dof
Protein Properties Length: 280aa    MW: 30721.5 Da    PI: 4.8254
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g021010.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof119.99.3e-383488660
            zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                       +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++
  Pd.00g021010.m01 34 PNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 88
                      58***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MFSAPVEQML QCPSGPFIMM DKRSWNKPHI EVAPNCPRCA SSNTKFCYYN NYSLSQPRYF  60
CKGCRRYWTK GGSLRNVPVG GGCRKNRRGK AAKLSQADRA SMSCFNHNSS SSDDTSGQHS  120
SGTDNQQGGG NGSDIDLAAV YAKFLNNNSS NPADEHDHLD QDHEPNLVIS SSELNDVDGS  180
QNSSKADQDL VEAVDHLLGG LGLLGNDDQV VQDVFWSDDA ATTSSLTSST ASFSWQPMVH  240
LQELDYSLPS DDDHMKIPTN LCSDNWSSFD FSGFEVFSRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21340.14e-40Dof family protein