PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g012800.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 322aa MW: 34806.5 Da PI: 7.395 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.4 | 2.8e-12 | 96 | 140 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ ++ + ++lG+g+W+ Iar Rt+ q+ s+ qky Pd.00g012800.m01 96 PWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKY 140 8*****************************89************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MTRRCSHCSH NGHNSRTCPN RGVKLFGVRL TDGSIRKSAS MGNLSHYAGS SSGLHPNNPG 60 SPGDTTNDHA GAADGYASED FVPGSSSSRE RKKGTPWTEE EHRMFLLGLQ KLGKGDWRGI 120 ARNYVISRTP TQVASHAQKY FIRQTNVSRR KRRSSLFDIV ADDSVEAPME PLDFLPGNNL 180 QAESQSNNPL PAPPALDEEC ESMDSTNSDG EPAPPQPDSS QSFYPMIYPA FFSPFPVPFP 240 LWPGYSTEPT KQDKHEVLKP TAVHSKSPIN VDELVGMSKL SLGEPIGHSG PSSLTLKLVE 300 GSSRQSAFHA NPGSGSSSMN SG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47390.1 | 1e-122 | MYB_related family protein |