PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pd.00g003210.m01 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | WRKY | ||||||||
Protein Properties | Length: 217aa MW: 24223.4 Da PI: 5.9763 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 54.3 | 2.7e-17 | 3 | 43 | 20 | 59 |
S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 r+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ Pd.00g003210.m01 3 KVRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 43 679******998****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MEKVRGYYRC SSSKGCSARK QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSQPS 60 KNGAGSKTSS NSSHQPHQKP ASPTKEEQNE TMNDNNHVSP VITAGSASTV KEEFEDIEKQ 120 LELDHHQFNG DHQAGFPYRP SMPDDQSNQS HHNEDFFADL GEIEADPLNL LFSQCFTADE 180 QQKGSKAAAL DPFNLFDCLK TLSFWFELNF ICGGGGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 1e-38 | WRKY family protein |