PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP044770.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | SRS | ||||||||
Protein Properties | Length: 229aa MW: 25608.6 Da PI: 9.1205 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 185.4 | 2.2e-57 | 15 | 158 | 5 | 153 |
DUF702 5 tasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrer.qqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101 +++CqdCGnq+kk+C+++RCRtCCks+gf+C+th kstWvp+++rr+ +qql ++ ++ ++ ++ ++ ++r+ +a+ + ++ ++s + + PCP044770.1 15 GSRCQDCGNQSKKECVYMRCRTCCKSKGFHCQTHFKSTWVPVYRRRHAhHQQLPSTDPQHPTHLHQGHNYNPRR------TAAGHVIINPSSSGTWQN 106 679*******************************************9734555555555555556555555554......566666666777778889 PP DUF702 102 tsslPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGle 153 ++++P+ev+s+a frcvrv+s++d ++ aYqt++ igGhvfkGiLydqG++ PCP044770.1 107 VNNFPAEVNSMANFRCVRVRSMEDTVNQQAYQTSMVIGGHVFKGILYDQGPD 158 99************************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MVRQGRGGRE EEIMGSRCQD CGNQSKKECV YMRCRTCCKS KGFHCQTHFK STWVPVYRRR 60 HAHHQQLPST DPQHPTHLHQ GHNYNPRRTA AGHVIINPSS SGTWQNVNNF PAEVNSMANF 120 RCVRVRSMED TVNQQAYQTS MVIGGHVFKG ILYDQGPDYT TATGQSSSSQ HVMNKQTSNF 180 INAAASASNI TASTSSAAAD QEVPHHHQLP SSYPLIPFNA FMPGTQFFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21400.1 | 4e-49 | SRS family protein |