PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044561.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

CPP

Protein Properties

Length: 952aa MW: 104099 Da PI: 7.1894

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044561.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.9	1.3e-15	494	530	3	39
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 +k+CnCkk+kClk+YC+Cfaag++C+e+C C++C+N PCP044561.1 494 CKRCNCKKTKCLKLYCDCFAAGVYCAETCACQGCFNI 530 79**********************************6 PP
2	TCR	30	1e-09	571	593	1	23
TCR 1 kekkgCnCkkskClkkYCeCfaa 23 ++k+gCnCkks ClkkYCeC++ PCP044561.1 571 RHKRGCNCKKSMCLKKYCECYQV 593 589******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 952 aa Download sequence
MDSPEIPKIM SNTSPSSDSP PVQESPVFSY ISNLSPIQPV KASHAAQGFP GLSSPPLVFT 60 SPRVNTLRET SFLKSFMIFI RPQYPQLSGA EKPKAQDEAK KFVDGPVDSK KHITQLQMGS 120 ITDTQDCETN SSSEGVDEYL ADPMEMDGTN SAQSVNPCLK ESKNSYKSEE PSEQATEDLQ 180 GKQIFDAKPV KIKELSHGAL PTSERPKVGS RISVDNAFNG EYHHGLHNQD VIVGHVLTLY 240 PTFKSQGFGG EHQDDCDHTR QSPPGRLQIG QVYEDCTENV SGTSKGMIGN MILHAPNKVK 300 NDQGGMHRRC LQFEEAPPCA TGKRDSSSKE KVNNSEPPAS TAELEIVKVS YAATSKRQMG 360 ASLPPLYGGS SPLTVPKPSG IGLHLNSIVN AVPVVRGATS IKLADHYIGL QVMKSSAVVS 420 HLLLENVRDD TETSIAASSS ITQSPHTVEF EHHGSPLEER KSDSQNVDSY KELNQYSSQK 480 KRKGTPSSKD SDGCKRCNCK KTKCLKLYCD CFAAGVYCAE TCACQGCFNI PDYEDTVLET 540 RQQIEARNPL AFTPKIVQLE EEIQFTPASA RHKRGCNCKK SMCLKKYCEC YQVSNTYLYF 600 HVTVLVIFSF SIHPKFVNHF ILKANVGCSS GCRCDGCKNV YGRKGDYGPI DHGVTKDMIS 660 DKAGKETFDE KLEMVATKKD ALSIELYDSH NHTPLTPSFQ CSDHADNVPK SPCLLTSYLR 720 SPESDLTVIS SYEKSARSSL RNSETSGILL ETSKELSDMG YYCWQEDYDN IGIADTFSPR 780 HDAAPTICHI TPLSDLCSKA SASSTSSRSH WKNASQIQLC PGSQGLSSNS SLRWCSSPLT 840 PMTQLGGMEC SQGLDFDHGL SDIMQEEMPE ILKDISATNK SVKVSSPNKK RVSPPHNHNH 900 ELGASSSGSL RSGRKFILKA VPSFPPLTPC SSSKGSNTIQ STGNLHDKGR KK

Sequence ? help Back to Top

Protein Sequence Length: 952 aa Download sequence

MDSPEIPKIM SNTSPSSDSP PVQESPVFSY ISNLSPIQPV KASHAAQGFP GLSSPPLVFT  60
SPRVNTLRET SFLKSFMIFI RPQYPQLSGA EKPKAQDEAK KFVDGPVDSK KHITQLQMGS  120
ITDTQDCETN SSSEGVDEYL ADPMEMDGTN SAQSVNPCLK ESKNSYKSEE PSEQATEDLQ  180
GKQIFDAKPV KIKELSHGAL PTSERPKVGS RISVDNAFNG EYHHGLHNQD VIVGHVLTLY  240
PTFKSQGFGG EHQDDCDHTR QSPPGRLQIG QVYEDCTENV SGTSKGMIGN MILHAPNKVK  300
NDQGGMHRRC LQFEEAPPCA TGKRDSSSKE KVNNSEPPAS TAELEIVKVS YAATSKRQMG  360
ASLPPLYGGS SPLTVPKPSG IGLHLNSIVN AVPVVRGATS IKLADHYIGL QVMKSSAVVS  420
HLLLENVRDD TETSIAASSS ITQSPHTVEF EHHGSPLEER KSDSQNVDSY KELNQYSSQK  480
KRKGTPSSKD SDGCKRCNCK KTKCLKLYCD CFAAGVYCAE TCACQGCFNI PDYEDTVLET  540
RQQIEARNPL AFTPKIVQLE EEIQFTPASA RHKRGCNCKK SMCLKKYCEC YQVSNTYLYF  600
HVTVLVIFSF SIHPKFVNHF ILKANVGCSS GCRCDGCKNV YGRKGDYGPI DHGVTKDMIS  660
DKAGKETFDE KLEMVATKKD ALSIELYDSH NHTPLTPSFQ CSDHADNVPK SPCLLTSYLR  720
SPESDLTVIS SYEKSARSSL RNSETSGILL ETSKELSDMG YYCWQEDYDN IGIADTFSPR  780
HDAAPTICHI TPLSDLCSKA SASSTSSRSH WKNASQIQLC PGSQGLSSNS SLRWCSSPLT  840
PMTQLGGMEC SQGLDFDHGL SDIMQEEMPE ILKDISATNK SVKVSSPNKK RVSPPHNHNH  900
ELGASSSGSL RSGRKFILKA VPSFPPLTPC SSSKGSNTIQ STGNLHDKGR KK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22780.1	4e-54	CPP family protein