PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044112.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 342aa MW: 38242.2 Da PI: 9.6424

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044112.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	93.5	1.8e-29	104	153	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWtp+LH++Fv+ave+LGG ++AtPk +l +m+vkgLt++hvkSHLQ PCP044112.1 104 PRLRWTPDLHRCFVHAVERLGGDQRATPKMVLPIMNVKGLTISHVKSHLQ 153 8************************************************8 PP
2	Myb_DNA-binding	43.3	8.2e-14	105	154	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r+rWT++++ +v+av++lGg+ t+k + m+ kg+t ++ks++q PCP044112.1 105 RLRWTPDLHRCFVHAVERLGGDqraTPKMVLPIMNvKGLTISHVKSHLQV 154 89**********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 342 aa Download sequence
MKDQAMKRVE GDDHHHQRSS SLKRSPSSSV DNGDQKPYTS SFDDGDGAGV TPMRSIALGK 60 QLVVHGYPHH FPAAPSHRQM SGSLLKSSSS SSVPVRPYVR SNMPRLRWTP DLHRCFVHAV 120 ERLGGDQRAT PKMVLPIMNV KGLTISHVKS HLQVCDRGQM YRSMKHEQGI QAAAMAAKKN 180 GVLLVSEHSN NSTYLKPINI AQPVCHQKND GVIKMYNYGP CQSNETCYIE DLATKNTSPL 240 AKWKDETKPL VPYQVSTKRY EQKPNSFIIF NDLLKRCSDN IGQESNHKHW EDLRGTESEY 300 DARMFLSLNS SSPKASRELL RLSKASGNSD ANDVSLELTL NT

Sequence ? help Back to Top

Protein Sequence Length: 342 aa Download sequence

MKDQAMKRVE GDDHHHQRSS SLKRSPSSSV DNGDQKPYTS SFDDGDGAGV TPMRSIALGK  60
QLVVHGYPHH FPAAPSHRQM SGSLLKSSSS SSVPVRPYVR SNMPRLRWTP DLHRCFVHAV  120
ERLGGDQRAT PKMVLPIMNV KGLTISHVKS HLQVCDRGQM YRSMKHEQGI QAAAMAAKKN  180
GVLLVSEHSN NSTYLKPINI AQPVCHQKND GVIKMYNYGP CQSNETCYIE DLATKNTSPL  240
AKWKDETKPL VPYQVSTKRY EQKPNSFIIF NDLLKRCSDN IGQESNHKHW EDLRGTESEY  300
DARMFLSLNS SSPKASRELL RLSKASGNSD ANDVSLELTL NT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	6e-30	G2-like family protein