PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP044048.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 317aa    MW: 34980.9 Da    PI: 4.4547
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP044048.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.18.4e-2091342128
          NAM   2 ppGfrFhPtdeelvveyLkkk.vegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                  p G+rFhPtd+elv  yL+ + ++gk+l +  +i e +++ ++ Pw + +++ +    +++++fF + ++   +g+r++r + + g+W+ t +dk + 
  PCP044048.1   9 PLGCRFHPTDQELVASYLRVRaLAGKPLGI-PFIYEYNLFgQTPPWVIWENLGGnslLDQDLFFFYELRS---SGSRSKRqIEAGGTWSGTSSDKVLG 102
                  78****************988255566666.779999877267889996533332224567888888766...4778888455589*******99888 PP

          NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +g+++g k+ + + ++ ++  ++ dW+++ey+l
  PCP044048.1 103 L-DGNQIGEKRHFKYTNKGSE--NNGDWLLEEYSL 134
                  8.999**********944333..478*******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MPLGYWGAPL GCRFHPTDQE LVASYLRVRA LAGKPLGIPF IYEYNLFGQT PPWVIWENLG  60
GNSLLDQDLF FFYELRSSGS RSKRQIEAGG TWSGTSSDKV LGLDGNQIGE KRHFKYTNKG  120
SENNGDWLLE EYSLLPSAVA GAKVVLSRLK RNPRSRCGIK MDSSVPTPEF NEKPPVKRAG  180
KQCGPTIAEL QDCPSTSSSP DEGNRMISET ANNDQECISN IHGNAKMTDF SVHDCVPLMS  240
DVYSDPICLG GEGGGTTSDE EILLHAEEFL LGFDQWLGTV EGESPQEHPQ IDECSQPSDG  300
IKYWTDCLWM SDSANDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.17e-14NAC family protein