PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP044030.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

WRKY

Protein Properties

Length: 582aa MW: 63960.8 Da PI: 7.5131

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP044030.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.2	1.6e-33	239	296	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k PCP044030.1 239 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGNHNHPK 296 8**************************************.*************85 PP
2	WRKY	106	2e-33	410	468	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ PCP044030.1 410 LDDGYRWRKYGQKVVKGNPNPRSYYKCTYPGCPVRKHVERASHDLRAVITTYEGKHNHD 468 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 582 aa Download sequence
MASSSGSLET SANSHTAAFT FSTHPFMTTS FSDLLASGTN EDSNPPRYIG HGGLSDRIAE 60 RTGSGVPKFK SLPPPSLPIS PPSISPSSYF AIPPGLSPAE LLDSPVLLNT SNILSSPTTG 120 SLAAHGAFNW KNNQQNVKQE SKNYSDFSFQ TQARPPISSS SSMFQSSNTS NQTLLIDYVL 180 FRTQEQAWNN YVQAQEPPKQ EYGSVQSLPS EMTTQTLQNN TPTNGGFYHQ SQTLSRKSDD 240 GYNWRKYGQK QVKGSENPRS YYKCTYPNCP TKKKVERSLD GQITEIVYKG NHNHPKPQNT 300 RRSSSNSHAI PASDATNNEL PDQTYANHGN SQMDSIGTPE NSSISIGDDD FEQSSQRSKS 360 GGGEEFDEDE PNAKKWKKDA DHNEGISAPG GRTVREPRVV VQTTSDIDIL DDGYRWRKYG 420 QKVVKGNPNP RSYYKCTYPG CPVRKHVERA SHDLRAVITT YEGKHNHDVP AARGSGSHAA 480 ANRPIPNNNN NNNVASAMRP ITHHTNNSAN TNSLQNLRQP TSEGQAPFTG LEMLQSQGTY 540 GFAGFDGNSM GSYMNQAQLS DNMFSKAKEE PRDDAFFESL LR

Sequence ? help Back to Top

Protein Sequence Length: 582 aa Download sequence

MASSSGSLET SANSHTAAFT FSTHPFMTTS FSDLLASGTN EDSNPPRYIG HGGLSDRIAE  60
RTGSGVPKFK SLPPPSLPIS PPSISPSSYF AIPPGLSPAE LLDSPVLLNT SNILSSPTTG  120
SLAAHGAFNW KNNQQNVKQE SKNYSDFSFQ TQARPPISSS SSMFQSSNTS NQTLLIDYVL  180
FRTQEQAWNN YVQAQEPPKQ EYGSVQSLPS EMTTQTLQNN TPTNGGFYHQ SQTLSRKSDD  240
GYNWRKYGQK QVKGSENPRS YYKCTYPNCP TKKKVERSLD GQITEIVYKG NHNHPKPQNT  300
RRSSSNSHAI PASDATNNEL PDQTYANHGN SQMDSIGTPE NSSISIGDDD FEQSSQRSKS  360
GGGEEFDEDE PNAKKWKKDA DHNEGISAPG GRTVREPRVV VQTTSDIDIL DDGYRWRKYG  420
QKVVKGNPNP RSYYKCTYPG CPVRKHVERA SHDLRAVITT YEGKHNHDVP AARGSGSHAA  480
ANRPIPNNNN NNNVASAMRP ITHHTNNSAN TNSLQNLRQP TSEGQAPFTG LEMLQSQGTY  540
GFAGFDGNSM GSYMNQAQLS DNMFSKAKEE PRDDAFFESL LR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-111	WRKY family protein