PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP043879.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | bHLH | ||||||||
Protein Properties | Length: 230aa MW: 25979.5 Da PI: 9.6203 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36 | 1.3e-11 | 83 | 135 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 +++ h +Er+RR+++ + ++ Lr+ lP ++K s ++ + +A +YIk+Lq PCP043879.1 83 KKVIHRDIERQRRQEMGTLYASLRSQLPLeY---LKGKRSISDHVHQAGNYIKHLQ 135 57789************************77...9********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MDYIPSNILQ FDQASQHADD LFQVSTFSYI ESTIQDNQAL PPTLSQDGRN LTWRPSSGRG 60 KRKASSSSIS FSEIDDKKPK GNKKVIHRDI ERQRRQEMGT LYASLRSQLP LEYLKGKRSI 120 SDHVHQAGNY IKHLQNNVQE LHNKRNQLKR SCNILCSAGT KNTQCKMQHS VIIVRPCRVG 180 MEVVVNTPLK QGLPLSRVLE ILVGEGLSTV SCISTEVNER SIYTTESEVL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G51790.1 | 2e-42 | bHLH family protein |