PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP043156.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 91aa MW: 10779.3 Da PI: 5.0992 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 39 | 2.4e-12 | 7 | 91 | 2 | 86 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 p f F+Ptd+++++++L k + +++ + +e ++e d++++ ePw++ ++ +++++++ fF++ +k tg r +r++ +g+Wk t PCP043156.1 7 PYAFCFQPTDQQIISFFLYKIAVKRQllpPPHDEYVHEEDLFDFkEPWEIWEE-YGGDQDLNFFCNLKK---TGLRIHRKIGEGTWKGT 91 67899**************9988888887666678*******9889****744.567899*****9877...799***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence |
MAGPLVPYAF CFQPTDQQII SFFLYKIAVK RQLLPPPHDE YVHEEDLFDF KEPWEIWEEY 60 GGDQDLNFFC NLKKTGLRIH RKIGEGTWKG T |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G61430.1 | 1e-08 | NAC family protein |