PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP040724.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 320aa    MW: 35106.4 Da    PI: 7.9057
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP040724.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1222.1e-383494262
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 k++al+cprC+st tkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rkn+k+s
  PCP040724.1 34 KDQALNCPRCNSTTTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNNKRS 94
                 7899*****************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MDTAHWPQGI GVVNSMEDFS STRPITERRA RPQKDQALNC PRCNSTTTKF CYYNNYSLSQ  60
PRYFCKTCRR YWTEGGSLRN VPVGGGSRKN NKRSNNSDSS SPSTSSAKKV AHDRDHHLTP  120
QSNFPSQSAS QNPNKIHFQG QDLNLAYPPA DQEYDNNNIT ELPFSIESID NRTYHHQNPS  180
SSATTTTSHH FSSAMELLKS TGIASRGLTS FVPMAAVEVP DHSSNITMFS SGFPMQEFKP  240
SRLSFSLDGF ESAGFGGCLQ GVQETTNTNH ARLLFPTAQD LKQQIPSSIT TAADFDQHNN  300
RGGGDSGGGY LNGMLGGGSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46590.15e-44Dof family protein