PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP039804.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 378aa    MW: 41144.1 Da    PI: 8.4002
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP039804.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.61.6e-3970130262
       zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                  +++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++
  PCP039804.1  70 QQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 130
                  57899*****************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MLSNCDHEKM ALLISSTTNE WPQLQQDIQI DDIHHQKGLN NNNNNVRSSS TSSPANRIME  60
KPGQEQLQLQ QQALKCPRCD SSNTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG  120
GGCRKNKRVK RPGSTSSTSS AMDGGATSSS SSVPSTTAAA NNNTNPNSHP SHIDQINPLF  180
YGLSSNPFMD TASGFDLHQL NHHAQLGLGF SSSSGTNMMS SDNYRNRFNP ASSSSLPSNY  240
SPMFSTSPST TVPTMASVLA SKFINGGAFK DIQARGPHQQ NQYFQSLLPF EDLQIAAGNN  300
GEAGGAVKDV KVEDHNGQNR LQWNNNNGSS HVNGNMNCQN QISEQMGLSD PTPYWNSSTL  360
GSNWHDPANL GSSVSSLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.23e-34Dof family protein