PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP039647.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 347aa MW: 39128.6 Da PI: 9.2518

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP039647.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	159.6	1.2e-49	15	142	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhP+deel+v+yL++k+ + +l++ + i+e+d+yk++PwdLp+k+ +e+ewyfFs+rd+ky++g+r+nra++ gyWka g dk++l++ ++ PCP039647.1 15 LPPGFRFHPSDEELIVHYLRNKMISYPLPA-QLITEIDLYKYNPWDLPNKALFGEDEWYFFSPRDRKYPNGDRPNRAAALGYWKAAGGDKPILTScGS 111 79**************************.89***********88888999*********************************99888 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 el+g+kk Lvfykgrapkg+kt+W+m+eyrl PCP039647.1 112 ELIGVKKALVFYKGRAPKGVKTEWLMNEYRL 142 99*************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MEKEPAFTTS STLQLPPGFR FHPSDEELIV HYLRNKMISY PLPAQLITEI DLYKYNPWDL 60 PNKALFGEDE WYFFSPRDRK YPNGDRPNRA AALGYWKAAG GDKPILTSCG SELIGVKKAL 120 VFYKGRAPKG VKTEWLMNEY RLLNSTINPS RSKGSMRLDD WVLCRVQQRG NTTKNTCNAQ 180 DIYNTESWRC LPKAGPTQPT DPIHRADLIT DFLHKDCRLL AFMLAGQAPS PIETNSSASL 240 QGRKDSCEVV SNNKVKSTIS ISSSGISSTL KRKIREENTK ENLFPLINLE SKSKDGNVLP 300 GKRLAAGNVV NCYIPNHLQN DIPKANPTVP ANFEEFNEMS FLATYFK

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MEKEPAFTTS STLQLPPGFR FHPSDEELIV HYLRNKMISY PLPAQLITEI DLYKYNPWDL  60
PNKALFGEDE WYFFSPRDRK YPNGDRPNRA AALGYWKAAG GDKPILTSCG SELIGVKKAL  120
VFYKGRAPKG VKTEWLMNEY RLLNSTINPS RSKGSMRLDD WVLCRVQQRG NTTKNTCNAQ  180
DIYNTESWRC LPKAGPTQPT DPIHRADLIT DFLHKDCRLL AFMLAGQAPS PIETNSSASL  240
QGRKDSCEVV SNNKVKSTIS ISSSGISSTL KRKIREENTK ENLFPLINLE SKSKDGNVLP  300
GKRLAAGNVV NCYIPNHLQN DIPKANPTVP ANFEEFNEMS FLATYFK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	6e-75	NAC family protein