PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP038570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 127aa MW: 14446.2 Da PI: 5.168 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 57.4 | 4.9e-18 | 8 | 112 | 1 | 101 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 +p GfrFhPtd+elv+ yL+ ++ + k + +i+e++++ ++ Pw +++ + +++++fF + ++++ +++r++r + + g+W++t +dk + PCP038570.1 8 MPLGFRFHPTDQELVSSYLRDRALSGKPLGKPFIQEFNLFgQTPPWVVWEQFGGnslLDQDLFFFYELRSRSDSDSRSKRqIEAGGTWSETSSDKVLG 105 699*****************9988777566578****98725678888654433223456889999999999999999995556899*****998766 PP NAM 94 skkgelvg 101 +g +g PCP038570.1 106 L-DGIPIG 112 5.555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MEVGYYGMPL GFRFHPTDQE LVSSYLRDRA LSGKPLGKPF IQEFNLFGQT PPWVVWEQFG 60 GNSLLDQDLF FFYELRSRSD SDSRSKRQIE AGGTWSETSS DKVLGLDGIP IGDKGHFRSF 120 FPDLKGI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03200.1 | 1e-10 | NAC family protein |