PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP035998.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | ERF | ||||||||
Protein Properties | Length: 238aa MW: 25829.8 Da PI: 6.7731 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 5.9e-18 | 37 | 87 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++kGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g PCP035998.1 37 KKFKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 87 59*****998.**********9...336************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MVKSERRILQ LPSVMTSSKT TSTSSSSSSS SSSACKKKFK GVRMRSWGSW VSEIRAPNQK 60 TRIWLGSYST AEAAARAYDA ALLCLKGSSA NLNFPTTASS HFIPQEMTVI SPKSIQRVAA 120 AAANSFVLDN NAATTTANIA LPPSAPPQST SSSSLVSSPS MSSSPSSNLI DDDLSSLMGA 180 FGGSYTPTYY DQSNDQLPMF SMDSWNNFDQ MFDGAWDPHP HMMYDLYEES DIRLWSFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21910.1 | 2e-37 | ERF family protein |