PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP035294.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 153aa MW: 17741.2 Da PI: 9.2791 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 177.7 | 3.2e-55 | 7 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPt+eelv +yLk+k+++ +++l +vi ++d+yk+ePwd+++ ++e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+vls PCP035294.1 7 VPPGFRFHPTEEELVGYYLKRKINSLQIDL-DVIVDIDLYKIEPWDIQArckLGYSEKNEWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDKAVLS- 102 69****************************.99**************953432234677**************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 k++ +g++ktLvfykgrap+g+ktdW+mheyrl PCP035294.1 103 KNNIIGMRKTLVFYKGRAPNGNKTDWIMHEYRL 135 8899***************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 153 aa Download sequence |
MEMESCVPPG FRFHPTEEEL VGYYLKRKIN SLQIDLDVIV DIDLYKIEPW DIQARCKLGY 60 SEKNEWYFFS HKDKKYPTGT RTNRATSAGF WKATGRDKAV LSKNNIIGMR KTLVFYKGRA 120 PNGNKTDWIM HEYRLQTSEH APPQASSSIS SID |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G71930.1 | 9e-84 | NAC family protein |