PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP034818.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 515aa MW: 57189.1 Da PI: 4.4447

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP034818.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	108.2	9.7e-34	21	147	2	127
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 p +rFhPt+ee+ ++L kk+++++ ++ + ++ +d++k+ePwdLp+ + + k wy Fs+ d ky ++ r nr+t++g+Wk tgk +++ s PCP034818.1 21 VPAIRFHPTEEEMA-DFLWKKMKSHNSQACHSLPVIDVCKFEPWDLPErmfpDTPYQAKAWYSFSQPDYKYINSPRCNRITEKGFWKITGKPRDISS- 116 6889******99.9******999899***********535553344789********************************99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyr 127 ++++ k+tL+fykgr +k+e+t Wvmhey PCP034818.1 117 -THVTCKKRTLTFYKGRVSKSERTGWVMHEYY 147 .77888999********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MGNISSTTTT STTAQSVPDM VPAIRFHPTE EEMADFLWKK MKSHNSQACH SLPVIDVCKF 60 EPWDLPERMF PDTPYQAKAW YSFSQPDYKY INSPRCNRIT EKGFWKITGK PRDISSTHVT 120 CKKRTLTFYK GRVSKSERTG WVMHEYYFTK PKQGSNTSQE RDPLRDFVLY RLKKKPNSMS 180 DNKKLQDTLI SDDLTDPGNG SCIASSSGND QAATAAAMNH DMTPAAEELL AYKELEDDLF 240 DSGNHDRGEP GGGISSDSTD QVIRDMIQQW KSCAPVGEYL NSLLTLPEPP QPPQPHQPPQ 300 LGNAPDVCSD ELVDPSTGGC ITGNTDNQDA AMNHMISAEE EILAYKELER ALLGNGDHDD 360 GEPGSGISSD FNDLAVDDMI LELSAELHKD SDSPFPPPEP PHTNQPHQLG DAPDVHSGEF 420 SNCPSPTNYD NESVINIVYN SQNRATSERI SQAYSQPEEN RGSPFQPLDQ LQNYPLQSPI 480 FSSELGELML ANTYIGRNES QSLNIEPATL FPQSS

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MGNISSTTTT STTAQSVPDM VPAIRFHPTE EEMADFLWKK MKSHNSQACH SLPVIDVCKF  60
EPWDLPERMF PDTPYQAKAW YSFSQPDYKY INSPRCNRIT EKGFWKITGK PRDISSTHVT  120
CKKRTLTFYK GRVSKSERTG WVMHEYYFTK PKQGSNTSQE RDPLRDFVLY RLKKKPNSMS  180
DNKKLQDTLI SDDLTDPGNG SCIASSSGND QAATAAAMNH DMTPAAEELL AYKELEDDLF  240
DSGNHDRGEP GGGISSDSTD QVIRDMIQQW KSCAPVGEYL NSLLTLPEPP QPPQPHQPPQ  300
LGNAPDVCSD ELVDPSTGGC ITGNTDNQDA AMNHMISAEE EILAYKELER ALLGNGDHDD  360
GEPGSGISSD FNDLAVDDMI LELSAELHKD SDSPFPPPEP PHTNQPHQLG DAPDVHSGEF  420
SNCPSPTNYD NESVINIVYN SQNRATSERI SQAYSQPEEN RGSPFQPLDQ LQNYPLQSPI  480
FSSELGELML ANTYIGRNES QSLNIEPATL FPQSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	8e-30	NAC family protein