PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP032938.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

bHLH

Protein Properties

Length: 429aa MW: 48342.1 Da PI: 6.1056

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP032938.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.3	6.7e-14	205	256	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A++++k+L+ PCP032938.1 205 QRMTHIAVERNRRRQMNDHLNVLRSLMPTS---YIQRGDQASIVGGAIDFVKELE 256 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 429 aa Download sequence
MERLVQGPSN PCQSFGEHLD FQLEQSLNFT TESLSFEEEE ESHHHLLMPS LEDRMPFLQM 60 LQSVNSSTTT TTPYFPLKEP SFQTLLKLQH FKKPWELDET YMPEMETTIQ RAPELESCVT 120 HEMVELQHSP VKSEGKDFHL QHSISECNQG EEKPSSAAGS PPLPTWVQVH NGAEETQQPK 180 SPATRERRKR KRTRPTKNKE EVESQRMTHI AVERNRRRQM NDHLNVLRSL MPTSYIQRGD 240 QASIVGGAID FVKELEHLLH SLEAQKRNRK TADQIQGMNN NSNNSSFSSS PASSSSPCSM 300 AMPSNGMFMT LSQCRIGSHD QEGTTAIATA FEDEGTAQNK SEAADIDVTV IQSHVNLKVQ 360 CQRRAGQLMK AILALEDLRL TVLHLNITSS QDTVLYSFNL KIEEGCHLGS ADDIARAVHQ 420 IFNFINGSS

Sequence ? help Back to Top

Protein Sequence Length: 429 aa Download sequence

MERLVQGPSN PCQSFGEHLD FQLEQSLNFT TESLSFEEEE ESHHHLLMPS LEDRMPFLQM  60
LQSVNSSTTT TTPYFPLKEP SFQTLLKLQH FKKPWELDET YMPEMETTIQ RAPELESCVT  120
HEMVELQHSP VKSEGKDFHL QHSISECNQG EEKPSSAAGS PPLPTWVQVH NGAEETQQPK  180
SPATRERRKR KRTRPTKNKE EVESQRMTHI AVERNRRRQM NDHLNVLRSL MPTSYIQRGD  240
QASIVGGAID FVKELEHLLH SLEAQKRNRK TADQIQGMNN NSNNSSFSSS PASSSSPCSM  300
AMPSNGMFMT LSQCRIGSHD QEGTTAIATA FEDEGTAQNK SEAADIDVTV IQSHVNLKVQ  360
CQRRAGQLMK AILALEDLRL TVLHLNITSS QDTVLYSFNL KIEEGCHLGS ADDIARAVHQ  420
IFNFINGSS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	192	RRKRKR
2	206	217	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	7e-73	bHLH family protein