PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP032934.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 147aa MW: 17181.6 Da PI: 9.9087 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 177.4 | 3.9e-55 | 9 | 136 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 lppGfrFhPtdeel+++yL +k+++ +++ ++i++vd++k+ePw+Lp+k+k +ekewyfFs rd+ky+tg r+nrat+ gyWk+tgkdke++++ ++ PCP032934.1 9 LPPGFRFHPTDEELITFYLMNKINDATFTG-RAITDVDLNKCEPWELPAKAKMGEKEWYFFSLRDRKYPTGVRTNRATNIGYWKTTGKDKEIFNSvTS 105 79*************************999.89***************99999****************************************99899 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 el g+kktLvfy+grap+gek++Wvmheyr+ PCP032934.1 106 ELAGMKKTLVFYRGRAPRGEKSNWVMHEYRI 136 99***************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MTAEPKEELP PGFRFHPTDE ELITFYLMNK INDATFTGRA ITDVDLNKCE PWELPAKAKM 60 GEKEWYFFSL RDRKYPTGVR TNRATNIGYW KTTGKDKEIF NSVTSELAGM KKTLVFYRGR 120 APRGEKSNWV MHEYRIHSKS GFRTSKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G24430.2 | 8e-90 | NAC family protein |