PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP032703.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 117aa MW: 13369 Da PI: 10.1072 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 109 | 5.5e-34 | 25 | 99 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+vls k++ +g++ktLvfykgrap+g+ktdW++heyrl PCP032703.1 25 SEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVLS-KDNIIGMRKTLVFYKGRAPNGNKTDWIIHEYRL 99 5678**************************************.8899****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
MSIFSHSENY VYVLCGTARC RLGYSEQNEW YFFSHKDKKY PTGTRTNRAT AAGFWKATGR 60 DKAVLSKDNI IGMRKTLVFY KGRAPNGNKT DWIIHEYRLQ TSEHAPPQAS SSTSSIH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G71930.1 | 5e-46 | NAC family protein |