PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP032440.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 838aa MW: 96107.6 Da PI: 8.4988

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP032440.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	171.5	2.7e-53	9	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeel+v+yLk++++++++++ ++i+evdiyk++Pw+Lp+k++ +e+ewyfF++rd+ky++g r+nrat sgyWkatg+dk+++s +++ PCP032440.1 9 LPPGFRFHPTDEELIVFYLKNQASSRPCPV-SIIPEVDIYKFDPWELPEKAEFGESEWYFFTPRDRKYPNGVRPNRATVSGYWKATGTDKAIYS-ESK 104 79**************************.89***********999999************************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy+gr pkg+k+dW+mheyrl PCP032440.1 105 YVGVKKALVFYQGRPPKGVKSDWIMHEYRL 134 **************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 838 aa Download sequence
MEAKRSSDLP PGFRFHPTDE ELIVFYLKNQ ASSRPCPVSI IPEVDIYKFD PWELPEKAEF 60 GESEWYFFTP RDRKYPNGVR PNRATVSGYW KATGTDKAIY SESKYVGVKK ALVFYQGRPP 120 KGVKSDWIMH EYRLSDSRKQ QANKHLGSMR LDDWVLCRIY KKKHLGKAYL DQKVEEDQKI 180 EMKTPETAKA NEEQVMLKFP RACSITSLLD MDYLGSISQL FSDNNSGYDF QNSMAGAGAG 240 QAQMFQFGET QNYQNTMDSV GHIVEDTKVL LNEVTRASFA HTRCQANGIA YRLAQLALQI 300 DSVRAXWSQR NKKGPKTWPL VGAAIEQFTN YDRMHDWLVK YLSESNSVVV PMPFTTYTYI 360 ADPANVEHVL KTNFANYPKG EVYRSYMEVL LGDGIFNVDG ELWRKQRKTA SFEFASKNLR 420 DFSTVVFRDY SLKLHSILSR ASFQGQQVDM QVETPSLQRP HCCRLDRDGF TSLDGIRNEY 480 MFFVQELLMR MTLDSICKVG FGVEIGTLAP NLPDNHFAKA FDTANIIVTL RFIDPLWRIK 540 RYLNVGSEAL LDKSIKTIDD FTYSVIRRRK AEIKETQQGS ENNKMKHDLL SRFIELGKDS 600 ESDLTDKSLR DVVLNFVIAG RDTTATTLSW AIYMVMTHPH VAEKLYSELK TFEEDQAREE 660 KVSLHPYDTE NLELFNRRVA QFAGLLSYDS LGKLYYLHAV ITETLRLYPA VPQDPKGILE 720 DDVLPDGTKV KAGGMVTYVP YSMGRMEYNW GPDAASFKPE RWLKEGFFQN ASPFKFTAFQ 780 AGPRICLGKD SAYLQMKMAL AILCRFYTFT LVAGHPVQYR MMTILSMAHG LKLTIARR

Sequence ? help Back to Top

Protein Sequence Length: 838 aa Download sequence

MEAKRSSDLP PGFRFHPTDE ELIVFYLKNQ ASSRPCPVSI IPEVDIYKFD PWELPEKAEF  60
GESEWYFFTP RDRKYPNGVR PNRATVSGYW KATGTDKAIY SESKYVGVKK ALVFYQGRPP  120
KGVKSDWIMH EYRLSDSRKQ QANKHLGSMR LDDWVLCRIY KKKHLGKAYL DQKVEEDQKI  180
EMKTPETAKA NEEQVMLKFP RACSITSLLD MDYLGSISQL FSDNNSGYDF QNSMAGAGAG  240
QAQMFQFGET QNYQNTMDSV GHIVEDTKVL LNEVTRASFA HTRCQANGIA YRLAQLALQI  300
DSVRAXWSQR NKKGPKTWPL VGAAIEQFTN YDRMHDWLVK YLSESNSVVV PMPFTTYTYI  360
ADPANVEHVL KTNFANYPKG EVYRSYMEVL LGDGIFNVDG ELWRKQRKTA SFEFASKNLR  420
DFSTVVFRDY SLKLHSILSR ASFQGQQVDM QVETPSLQRP HCCRLDRDGF TSLDGIRNEY  480
MFFVQELLMR MTLDSICKVG FGVEIGTLAP NLPDNHFAKA FDTANIIVTL RFIDPLWRIK  540
RYLNVGSEAL LDKSIKTIDD FTYSVIRRRK AEIKETQQGS ENNKMKHDLL SRFIELGKDS  600
ESDLTDKSLR DVVLNFVIAG RDTTATTLSW AIYMVMTHPH VAEKLYSELK TFEEDQAREE  660
KVSLHPYDTE NLELFNRRVA QFAGLLSYDS LGKLYYLHAV ITETLRLYPA VPQDPKGILE  720
DDVLPDGTKV KAGGMVTYVP YSMGRMEYNW GPDAASFKPE RWLKEGFFQN ASPFKFTAFQ  780
AGPRICLGKD SAYLQMKMAL AILCRFYTFT LVAGHPVQYR MMTILSMAHG LKLTIARR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	1e-106	NAC family protein