PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PCP031899.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 103aa MW: 12513.3 Da PI: 8.751 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.5 | 5.6e-07 | 34 | 71 | 5 | 44 |
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 T++E++l+++ ++ G++ W++Ia +++ gR ++ + +w PCP031899.1 34 TEQEEDLIYRMYRLVGPR-WDLIAGRIP-GRKAEVLERFW 71 9***************99.*********.**999888888 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 103 aa Download sequence |
MESMDRCHQK RPKITITDQS EEVISNEWKF INITEQEEDL IYRMYRLVGP RWDLIAGRIP 60 GRKAEVLERF WIMRHCDAFA EKRNQHKIEG SNIDRRQMFN GFK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G53200.1 | 2e-33 | MYB_related family protein |