PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP031507.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TALE

Protein Properties

Length: 535aa MW: 60191.4 Da PI: 7.1601

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP031507.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.9	1.6e-08	454	492	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + PCP031507.1 454 MFQNflHPYPKDSEKHVLAVKSGLTRNQVSNWFINARVR 492 5887779******************************88 PP
2	BELL	63.2	5.7e-21	362	426	2	67
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkda 67 +qe++ kk+kLl ll +d+ Y+q+v++++tv+s+F+a+++ ++ ++++++ l++iS +++L+++ PCP031507.1 362 KQEIKTKKTKLLALLRTLDDCYNQCVDEIHTVVSAFHAATETDP-HLHARFVLQTISVLYKSLRER 426 589***************************************.*****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MMDNEMYNVP ADSRNSLVMD GVVPHTTVNS LVQSYSFDLN HQNRMMALPP VLSTFHGELV 60 MDSHSDLNNA NCDSVAESSP FLISHRGSNV RESSFVSSSF ADNTVFQATP HSSASLAALF 120 AARGSTFLQE NLNNLAISAM PFNSSEAYVL NDCSNNSNSL LAASVNCGYD EMLGSINRQW 180 EINKYAAPLE LGDGSSVRIG LQTYSSVGNV DPNGWLSSDG ASVMTYNSSR SSKFSNELAL 240 TLATSRPLEI RNQCSDVGSS GIAQPCLNQT RFTSPEQYSS NSEEFSLSYS SCKPPQLSQV 300 ICGSRYLHVV QEILSDIANY SLENLDQSSF SSARLVSERG MSAMDDDLDR RFEVPKEPAL 360 RKQEIKTKKT KLLALLRTLD DCYNQCVDEI HTVVSAFHAA TETDPHLHAR FVLQTISVLY 420 KSLRERHLKK KEHQIWRPQR GLPERSVSVL RAWMFQNFLH PYPKDSEKHV LAVKSGLTRN 480 QVSNWFINAR VRLWKPMIEE MYSEMNRRKT RQNENLERTH RSHHIRINNH KFGVN

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MMDNEMYNVP ADSRNSLVMD GVVPHTTVNS LVQSYSFDLN HQNRMMALPP VLSTFHGELV  60
MDSHSDLNNA NCDSVAESSP FLISHRGSNV RESSFVSSSF ADNTVFQATP HSSASLAALF  120
AARGSTFLQE NLNNLAISAM PFNSSEAYVL NDCSNNSNSL LAASVNCGYD EMLGSINRQW  180
EINKYAAPLE LGDGSSVRIG LQTYSSVGNV DPNGWLSSDG ASVMTYNSSR SSKFSNELAL  240
TLATSRPLEI RNQCSDVGSS GIAQPCLNQT RFTSPEQYSS NSEEFSLSYS SCKPPQLSQV  300
ICGSRYLHVV QEILSDIANY SLENLDQSSF SSARLVSERG MSAMDDDLDR RFEVPKEPAL  360
RKQEIKTKKT KLLALLRTLD DCYNQCVDEI HTVVSAFHAA TETDPHLHAR FVLQTISVLY  420
KSLRERHLKK KEHQIWRPQR GLPERSVSVL RAWMFQNFLH PYPKDSEKHV LAVKSGLTRN  480
QVSNWFINAR VRLWKPMIEE MYSEMNRRKT RQNENLERTH RSHHIRINNH KFGVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-80	TALE family protein