PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031321.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 303aa    MW: 33962.3 Da    PI: 5.4664
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031321.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof119.71.1e-373993660
       zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                  +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rkn++
  PCP031321.1 39 PNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRR 93
                 58***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MFTDPTVKQM LQCHPSGQGQ FMMMEMKRPW NKSHIEVAPN CPRCASSNTK FCYYNNYSLS  60
QPRYFCKGCR RYWTKGGSLR NVPVGGGCRK NRRGKAAKLA QTDRASLSYF QHHNSSSGTE  120
DDPSGNNQPG GSNASDIDLA VVFAKFLNHN STTPDDHYHD PNLVISRSAL NDHDGSQNSS  180
KADDLVEAVD HYLLEGHQQS QEENVQTFMG INHNDDMNIH EFELQGLLGD EDQVVQDVFW  240
SHDATTSSLP SSTASFTWQP MVHLQELDCS LPSDDDQMKI STNLCGDNWS SIDFSGFEVF  300
SRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21340.18e-47Dof family protein