PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP031171.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 591aa MW: 65639.2 Da PI: 9.5727

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP031171.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.6	5.1e-07	498	547	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ PCP031171.1 498 RRPFSVPEVEALVQAVEKLGTGRWRDVKLRAFestKHRTYVDLKDKWKTL 547 567888899***************9888889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MVLQRRLDYG FSGYRMPEVP RASRSARGRG PIRKKLDANQ IHAFEILASV AGKLLQESKD 60 PLPTNDSFGK DPHFKFGGIT KSKQQDKGSL LKEEPCELGS CDEETFSYVH GLQERRKSYT 120 LNGVSHSQEN FSYQINSVSK SLDSERINFG KGLGAVDSRN SCGSHSNKVV NDSPLSEDSI 180 AEKPQGLLKR KQVTEPSQDT SMKEERTEFL GSSEDVMEME ERPHELVSSR HDVKTPFSGD 240 CKNHGPFLSH CANIRVVNRD DDKNTMTKEF EHPPEDGDKK ITNLAAPGHA VRSSSTTGQQ 300 VPPKSNDCNV KLSIKSFKVP ELFIEVPTTA TVGSLKRTVM EAVTSIFGDG LHVGILVQGK 360 KVRDDNKTLL QTGISQDDKR HNLGFILEPK RAKLTYPPCS EDPSLVSGRS QELTRHSASL 420 VSQPGTSDVS MSPPVLSLGG CIERDFKEVP SLASTSTDKT PPTSQALVAV PPISMKALAV 480 VPFHRKSGHQ EYVQRRIRRP FSVPEVEALV QAVEKLGTGR WRDVKLRAFE STKHRTYVDL 540 KDKWKTLVHT ARISPQQRRG EPVPQELLDR VLAAHAYWSQ RHAKQQVKAA V

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MVLQRRLDYG FSGYRMPEVP RASRSARGRG PIRKKLDANQ IHAFEILASV AGKLLQESKD  60
PLPTNDSFGK DPHFKFGGIT KSKQQDKGSL LKEEPCELGS CDEETFSYVH GLQERRKSYT  120
LNGVSHSQEN FSYQINSVSK SLDSERINFG KGLGAVDSRN SCGSHSNKVV NDSPLSEDSI  180
AEKPQGLLKR KQVTEPSQDT SMKEERTEFL GSSEDVMEME ERPHELVSSR HDVKTPFSGD  240
CKNHGPFLSH CANIRVVNRD DDKNTMTKEF EHPPEDGDKK ITNLAAPGHA VRSSSTTGQQ  300
VPPKSNDCNV KLSIKSFKVP ELFIEVPTTA TVGSLKRTVM EAVTSIFGDG LHVGILVQGK  360
KVRDDNKTLL QTGISQDDKR HNLGFILEPK RAKLTYPPCS EDPSLVSGRS QELTRHSASL  420
VSQPGTSDVS MSPPVLSLGG CIERDFKEVP SLASTSTDKT PPTSQALVAV PPISMKALAV  480
VPFHRKSGHQ EYVQRRIRRP FSVPEVEALV QAVEKLGTGR WRDVKLRAFE STKHRTYVDL  540
KDKWKTLVHT ARISPQQRRG EPVPQELLDR VLAAHAYWSQ RHAKQQVKAA V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	2e-98	MYB_related family protein