PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP031143.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 319aa    MW: 35309.7 Da    PI: 8.9197
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP031143.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.95.9e-30165224159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+
  PCP031143.1 165 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApSCPVKKKVQRSVEDQSILVATYEGEHNHP 224
                  58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MDYSAAYDDT SLDLNSMPLR LFNDTPMIKK EVHSKILIDF GRQLSPKEES GALLEELHRV  60
SAENKKLTEM LTVMGENYNA LRNQLLEYMS KNPEKELSPI SKKRKSESSN NNANSNNIMN  120
GAVNRNSESS SSDGESYKKP REEIVKAKIS RACVQTEASD TSLVVKDGYQ WRKYGQKVTR  180
DNPCPRAYFK CSFAPSCPVK KKVQRSVEDQ SILVATYEGE HNHPNPSQIE ATSGSNHCVA  240
IGSVPCSTSL GSTGPTITLD LTKSKSSTAD AKSTKTRTET PEVRKFLVQQ MASSLTKDPD  300
FTKALAAAIS GRILQHNIY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.15e-91WRKY family protein