PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP030473.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 302aa    MW: 33761.1 Da    PI: 5.006
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP030473.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof119.81e-373993660
       zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                  +cprC s+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rkn++
  PCP030473.1 39 PNCPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKNRR 93
                 58***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MFIAPSVEQI LQCPPSGLEQ FMMMEMKRPW NKSHIEIAPN CPRCASSNTK FCYYNNYSLS  60
QPRYFCKGCR RYWTKGGSLR NIPVGGGCRK NRRGKVARLS QADHGSSSYF QHHNSSTTTE  120
DDLAGNTQPG GSNAPDIDLA VVFAKFLNHN STIPDGHDHD PNLVISSSAL NGRDGSHNSS  180
KADDLVEAVG HHYLHEGHQS QEENIQTFMG INHNDDMNIH EFELQGLLGD DEQVVQDMFW  240
SDDAMTSLTS STASFTWQPM MDPQELDCSP PSDDDQMKIS TNLCGDNWSS FEFSGFEVFS  300
RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21340.12e-44Dof family protein