PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP029833.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 1026aa MW: 114782 Da PI: 7.3727

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP029833.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	86.8	4.1e-27	6	84	53	128
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128 a++kewyfF+kr +ky+++ r+nr+t sg+Wkatg dk+++s+ +++ +glkktLv+y g+a kg+ktdW+m+e+rl PCP029833.1 6 AGDKEWYFFCKRGRKYKNSIRPNRVTGSGFWKATGIDKPIHSHggeGHACIGLKKTLVYYCGSAGKGSKTDWMMQEFRL 84 5789************************************96555555*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1026 aa Download sequence
MFTETAGDKE WYFFCKRGRK YKNSIRPNRV TGSGFWKATG IDKPIHSHGG EGHACIGLKK 60 TLVYYCGSAG KGSKTDWMMQ EFRLPNSSSS YEHNNRSSNT KNMNTDLQQE AFDGTHLVER 120 RNAKKLRNKP AIFFSHALFT LVNACRAPCS ALGFEENHVQ ALGLTIFMSL HRLLLLLMVN 180 TWPEVKFTAE ELRRIMDYKH NIRNMSVIAH VDHGKSTLTD SLVAAAGIIA QEVAGDVRMT 240 DTRADEAERG ITIKSTGISL YYEMTDESLQ RFKGERNGNE YLINLIDSPG HVDFSSEVTA 300 ALRITDGALV VVDCIEGVCV QTETVLRQAL GERIRPVLTV NKMDRCFLEL QVDGEEAYQT 360 FQRVIENANV IMATYEDPLL GDVQVYPEKG TVAFSAGLHG WAFTLTNFAK MYASKFGVDE 420 SKMMERLWGE NFFDPATKKW TSKNTGTATC KRGFVQFCYE PIKQIIKTCM NDQKDKLWPM 480 LTKLGVTMKS DEKDLMGKAL MKRVMQTWLP ASTALLEMMI FHLPSPSTAQ RYRVENLYEG 540 PLDDQYANAI RNCDPEGPLM LYVSKMIPAS DKGRFFAFGR VFAGKVQTGL KVRIMGPNFV 600 PGEKKDLYVK NVQRTVIWMG KRQETVEDVP CGNTVALVGL DQFITKNATL TNEKEVDAHP 660 IRAMKFSVSP VVRVAVQCKV ASDLPKLVEG LKRLAKSDPM VVCSIEESGE HIIAGAGELH 720 LEICLKDLQD DFMGGAEIIK SDPVVSFRET VLDKSCRTVM SKSPNKHNRL YMEARPLEEG 780 LPEAIDDGRI GPRDDPKIRS KILAEEFGWD KDLAKKIWCF GPETTGPNMV VDMCKGVQYL 840 NEIKDSVVAG FQWASKEGAL AEENMRGICF EVCDVVLHAD AIHRGGGQVI PTARRVIYAS 900 QLTAKPRLLE PVYLVEIQAP EGALGGIYSV LNQKRGHVFE EMQRPGTPLY NIKAYLPVVE 960 SFGFSGQLRA ATSGQAFPQC VFDHWEMMSS DPLEAGSQAA ALVTDIRKRK GLKEQMTPLS 1020 EFEDKL

Sequence ? help Back to Top

Protein Sequence Length: 1026 aa Download sequence

MFTETAGDKE WYFFCKRGRK YKNSIRPNRV TGSGFWKATG IDKPIHSHGG EGHACIGLKK  60
TLVYYCGSAG KGSKTDWMMQ EFRLPNSSSS YEHNNRSSNT KNMNTDLQQE AFDGTHLVER  120
RNAKKLRNKP AIFFSHALFT LVNACRAPCS ALGFEENHVQ ALGLTIFMSL HRLLLLLMVN  180
TWPEVKFTAE ELRRIMDYKH NIRNMSVIAH VDHGKSTLTD SLVAAAGIIA QEVAGDVRMT  240
DTRADEAERG ITIKSTGISL YYEMTDESLQ RFKGERNGNE YLINLIDSPG HVDFSSEVTA  300
ALRITDGALV VVDCIEGVCV QTETVLRQAL GERIRPVLTV NKMDRCFLEL QVDGEEAYQT  360
FQRVIENANV IMATYEDPLL GDVQVYPEKG TVAFSAGLHG WAFTLTNFAK MYASKFGVDE  420
SKMMERLWGE NFFDPATKKW TSKNTGTATC KRGFVQFCYE PIKQIIKTCM NDQKDKLWPM  480
LTKLGVTMKS DEKDLMGKAL MKRVMQTWLP ASTALLEMMI FHLPSPSTAQ RYRVENLYEG  540
PLDDQYANAI RNCDPEGPLM LYVSKMIPAS DKGRFFAFGR VFAGKVQTGL KVRIMGPNFV  600
PGEKKDLYVK NVQRTVIWMG KRQETVEDVP CGNTVALVGL DQFITKNATL TNEKEVDAHP  660
IRAMKFSVSP VVRVAVQCKV ASDLPKLVEG LKRLAKSDPM VVCSIEESGE HIIAGAGELH  720
LEICLKDLQD DFMGGAEIIK SDPVVSFRET VLDKSCRTVM SKSPNKHNRL YMEARPLEEG  780
LPEAIDDGRI GPRDDPKIRS KILAEEFGWD KDLAKKIWCF GPETTGPNMV VDMCKGVQYL  840
NEIKDSVVAG FQWASKEGAL AEENMRGICF EVCDVVLHAD AIHRGGGQVI PTARRVIYAS  900
QLTAKPRLLE PVYLVEIQAP EGALGGIYSV LNQKRGHVFE EMQRPGTPLY NIKAYLPVVE  960
SFGFSGQLRA ATSGQAFPQC VFDHWEMMSS DPLEAGSQAA ALVTDIRKRK GLKEQMTPLS  1020
EFEDKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	1e-37	NAC family protein