PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028417.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

ERF

Protein Properties

Length: 495aa MW: 55673.1 Da PI: 9.4096

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028417.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	63.4	4.7e-20	129	179	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+++AeIrdp++ng +r++lg++ tae+Aa a+++a+ k++g PCP028417.1 129 HFRGVRRRP-WGKYAAEIRDPKKNG--ARVWLGTYETAEGAALAYDQAAFKMRG 179 69*****.*******9998..***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MFEDIYLEAD FALLESIRQH LLDDNFDTNL QESSATASGS PPPMYCRSLS FSNLLLTKSW 60 SDMPFRVELE DTNDVVGALS DGTAGWSMLS DHHHVDVIET TPAISEPQEV VREEIAVARE 120 TRTPLTGQHF RGVRRRPWGK YAAEIRDPKK NGARVWLGTY ETAEGAALAY DQAAFKMRGS 180 KAKLNFPHLI GSGCEPVRVT AKRRAPEAES LAYLNGLRSI CPLINILGRG NSSSMSSSSH 240 KGDDGVPPLY RQDGSLSKVG YFKAAHFKII SDNSLSDFLV AYMHAISLGV HVKRVKQGNS 300 YEPCSMAQSA IKFHPYYFVL GFTFPMPQFF QEVLYSMKCA PAQYSPNAVR VMVGFFNLSQ 360 FFDLDLTVNE FWSWKALSHS SSHLSRCALL MALKKGLHQS VGEKKRLRVA TRSVNLWISF 420 KVVGDLISRI ARICLGSALI PHWVTRYPKN LPKDTQNVHL AGLSFILYFL RMSKVFAKLL 480 IWFDRYLPFT MMLLT

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MFEDIYLEAD FALLESIRQH LLDDNFDTNL QESSATASGS PPPMYCRSLS FSNLLLTKSW  60
SDMPFRVELE DTNDVVGALS DGTAGWSMLS DHHHVDVIET TPAISEPQEV VREEIAVARE  120
TRTPLTGQHF RGVRRRPWGK YAAEIRDPKK NGARVWLGTY ETAEGAALAY DQAAFKMRGS  180
KAKLNFPHLI GSGCEPVRVT AKRRAPEAES LAYLNGLRSI CPLINILGRG NSSSMSSSSH  240
KGDDGVPPLY RQDGSLSKVG YFKAAHFKII SDNSLSDFLV AYMHAISLGV HVKRVKQGNS  300
YEPCSMAQSA IKFHPYYFVL GFTFPMPQFF QEVLYSMKCA PAQYSPNAVR VMVGFFNLSQ  360
FFDLDLTVNE FWSWKALSHS SSHLSRCALL MALKKGLHQS VGEKKRLRVA TRSVNLWISF  420
KVVGDLISRI ARICLGSALI PHWVTRYPKN LPKDTQNVHL AGLSFILYFL RMSKVFAKLL  480
IWFDRYLPFT MMLLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44840.1	1e-48	ERF family protein