PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028308.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 409aa MW: 46404.8 Da PI: 6.6371

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028308.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170	7.8e-53	22	148	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 +pGfrFhPtdeel+++yL+ kv + +++ i+evd++++ePw+Lp +k +e+ewyfFs rd+ky+tg r+nrat +gyWkatgkd++v+s+ +g+ PCP028308.1 22 QPGFRFHPTDEELITFYLASKVYNGSFRG-VRIAEVDLNRCEPWELPDVAKMGEREWYFFSLRDRKYPTGMRTNRATGAGYWKATGKDRQVFSAsTGA 118 69**********************999.55***********8888899**********************************987888 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 l g+kktLvfykgrap+g+kt+Wvmheyrl PCP028308.1 119 LLGMKKTLVFYKGRAPRGHKTKWVMHEYRL 148 9*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MGMEEVMSEL MSGEDENGQG FQPGFRFHPT DEELITFYLA SKVYNGSFRG VRIAEVDLNR 60 CEPWELPDVA KMGEREWYFF SLRDRKYPTG MRTNRATGAG YWKATGKDRQ VFSASTGALL 120 GMKKTLVFYK GRAPRGHKTK WVMHEYRLDG HFSSYRHDCQ EEWVICRINH KSGKKKSPLL 180 DHEAAASAIS NCNYLPPLLD PSPALLLQES CPEYQNPIQL QALPPIHQEN HDTFSSFPAI 240 NAFQTHQLPS FSRSLLFKSL FDQDCNSNSS SSTVPKQCKT ELANYFSRFQ TPDNSHNNNN 300 STRNNLHDLN FVVELEKNHD HQYQPNPPYH HLHDQYNDLL PFDYLDYSTS VLGFSSAEAA 360 EATTSTSTAT AAVHAHDTSP SVVFTRAGFQ TMLDLPPIKL PGESCRPYA

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MGMEEVMSEL MSGEDENGQG FQPGFRFHPT DEELITFYLA SKVYNGSFRG VRIAEVDLNR  60
CEPWELPDVA KMGEREWYFF SLRDRKYPTG MRTNRATGAG YWKATGKDRQ VFSASTGALL  120
GMKKTLVFYK GRAPRGHKTK WVMHEYRLDG HFSSYRHDCQ EEWVICRINH KSGKKKSPLL  180
DHEAAASAIS NCNYLPPLLD PSPALLLQES CPEYQNPIQL QALPPIHQEN HDTFSSFPAI  240
NAFQTHQLPS FSRSLLFKSL FDQDCNSNSS SSTVPKQCKT ELANYFSRFQ TPDNSHNNNN  300
STRNNLHDLN FVVELEKNHD HQYQPNPPYH HLHDQYNDLL PFDYLDYSTS VLGFSSAEAA  360
EATTSTSTAT AAVHAHDTSP SVVFTRAGFQ TMLDLPPIKL PGESCRPYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	1e-93	NAC family protein